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DOE Joint Genome Institute

government
https://jgi.doe.gov/
Activity Feed Request to join this org

AI & ML interests

Genomics, life science, DNA, environmental, energy, foundation models

Zhong Wang's profile pictureUri Neri's profile pictureDrew Doering's profile pictureBen Bowen's profile picturemarcin pawel joachimiak's profile pictureRob Egan's profile pictureFrederik Schulz's profile pictureMatteo Santamaria's profile picture

DOEJGI 's collections 2

GenomeOcean-v1.2
Added GTDB diverse dataset, trained to plateau
  • DOEJGI/GenomeOcean-100M-v1.2

    0.1B • Updated Apr 6 • 89
  • DOEJGI/GenomeOcean-500M-v1.2

    0.5B • Updated Apr 6 • 83
  • ThomasYn/GenomeOcean-500M-v1.2-AWQ

    0.5B • Updated Mar 22
  • ThomasYn/GenomeOcean-100M-v1.2-AWQ

    0.1B • Updated Mar 22
GenomeOcean pilot models
Proof-of-concept training genome foundation models using assembled metagenomes.
  • DOEJGI/GenomeOcean-500M

    0.5B • Updated Feb 10, 2025 • 667 • 2
  • DOEJGI/GenomeOcean-100M

    0.1B • Updated Feb 10, 2025 • 1.13k • 1
  • DOEJGI/GenomeOcean-4B

    4B • Updated Feb 10, 2025 • 4.36k • 10
  • DOEJGI/GenomeOcean-4B-bgcFM

    4B • Updated Feb 10, 2025 • 57 • 2
GenomeOcean-v1.2
Added GTDB diverse dataset, trained to plateau
  • DOEJGI/GenomeOcean-100M-v1.2

    0.1B • Updated Apr 6 • 89
  • DOEJGI/GenomeOcean-500M-v1.2

    0.5B • Updated Apr 6 • 83
  • ThomasYn/GenomeOcean-500M-v1.2-AWQ

    0.5B • Updated Mar 22
  • ThomasYn/GenomeOcean-100M-v1.2-AWQ

    0.1B • Updated Mar 22
GenomeOcean pilot models
Proof-of-concept training genome foundation models using assembled metagenomes.
  • DOEJGI/GenomeOcean-500M

    0.5B • Updated Feb 10, 2025 • 667 • 2
  • DOEJGI/GenomeOcean-100M

    0.1B • Updated Feb 10, 2025 • 1.13k • 1
  • DOEJGI/GenomeOcean-4B

    4B • Updated Feb 10, 2025 • 4.36k • 10
  • DOEJGI/GenomeOcean-4B-bgcFM

    4B • Updated Feb 10, 2025 • 57 • 2
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