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from collections import UserDict |
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import pytest |
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import networkx as nx |
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from networkx.utils import edges_equal |
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from .test_multigraph import BaseMultiGraphTester |
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from .test_multigraph import TestEdgeSubgraph as _TestMultiGraphEdgeSubgraph |
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from .test_multigraph import TestMultiGraph as _TestMultiGraph |
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class BaseMultiDiGraphTester(BaseMultiGraphTester): |
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def test_edges(self): |
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G = self.K3 |
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edges = [(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)] |
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assert sorted(G.edges()) == edges |
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assert sorted(G.edges(0)) == [(0, 1), (0, 2)] |
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pytest.raises((KeyError, nx.NetworkXError), G.edges, -1) |
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def test_edges_data(self): |
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G = self.K3 |
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edges = [(0, 1, {}), (0, 2, {}), (1, 0, {}), (1, 2, {}), (2, 0, {}), (2, 1, {})] |
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assert sorted(G.edges(data=True)) == edges |
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assert sorted(G.edges(0, data=True)) == [(0, 1, {}), (0, 2, {})] |
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pytest.raises((KeyError, nx.NetworkXError), G.neighbors, -1) |
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def test_edges_multi(self): |
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G = self.K3 |
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assert sorted(G.edges()) == [(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)] |
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assert sorted(G.edges(0)) == [(0, 1), (0, 2)] |
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G.add_edge(0, 1) |
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assert sorted(G.edges()) == [ |
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(0, 1), |
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(0, 1), |
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(0, 2), |
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(1, 0), |
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(1, 2), |
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(2, 0), |
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(2, 1), |
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] |
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def test_out_edges(self): |
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G = self.K3 |
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assert sorted(G.out_edges()) == [(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)] |
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assert sorted(G.out_edges(0)) == [(0, 1), (0, 2)] |
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pytest.raises((KeyError, nx.NetworkXError), G.out_edges, -1) |
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assert sorted(G.out_edges(0, keys=True)) == [(0, 1, 0), (0, 2, 0)] |
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def test_out_edges_multi(self): |
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G = self.K3 |
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assert sorted(G.out_edges()) == [(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)] |
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assert sorted(G.out_edges(0)) == [(0, 1), (0, 2)] |
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G.add_edge(0, 1, 2) |
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assert sorted(G.out_edges()) == [ |
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(0, 1), |
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(0, 1), |
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(0, 2), |
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(1, 0), |
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(1, 2), |
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(2, 0), |
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(2, 1), |
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] |
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def test_out_edges_data(self): |
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G = self.K3 |
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assert sorted(G.edges(0, data=True)) == [(0, 1, {}), (0, 2, {})] |
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G.remove_edge(0, 1) |
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G.add_edge(0, 1, data=1) |
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assert sorted(G.edges(0, data=True)) == [(0, 1, {"data": 1}), (0, 2, {})] |
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assert sorted(G.edges(0, data="data")) == [(0, 1, 1), (0, 2, None)] |
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assert sorted(G.edges(0, data="data", default=-1)) == [(0, 1, 1), (0, 2, -1)] |
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def test_in_edges(self): |
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G = self.K3 |
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assert sorted(G.in_edges()) == [(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)] |
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assert sorted(G.in_edges(0)) == [(1, 0), (2, 0)] |
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pytest.raises((KeyError, nx.NetworkXError), G.in_edges, -1) |
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G.add_edge(0, 1, 2) |
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assert sorted(G.in_edges()) == [ |
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(0, 1), |
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(0, 1), |
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(0, 2), |
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(1, 0), |
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(1, 2), |
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(2, 0), |
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(2, 1), |
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] |
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assert sorted(G.in_edges(0, keys=True)) == [(1, 0, 0), (2, 0, 0)] |
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def test_in_edges_no_keys(self): |
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G = self.K3 |
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assert sorted(G.in_edges()) == [(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)] |
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assert sorted(G.in_edges(0)) == [(1, 0), (2, 0)] |
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G.add_edge(0, 1, 2) |
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assert sorted(G.in_edges()) == [ |
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(0, 1), |
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(0, 1), |
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(0, 2), |
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(1, 0), |
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(1, 2), |
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(2, 0), |
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(2, 1), |
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] |
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assert sorted(G.in_edges(data=True, keys=False)) == [ |
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(0, 1, {}), |
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(0, 1, {}), |
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(0, 2, {}), |
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(1, 0, {}), |
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(1, 2, {}), |
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(2, 0, {}), |
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(2, 1, {}), |
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] |
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def test_in_edges_data(self): |
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G = self.K3 |
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assert sorted(G.in_edges(0, data=True)) == [(1, 0, {}), (2, 0, {})] |
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G.remove_edge(1, 0) |
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G.add_edge(1, 0, data=1) |
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assert sorted(G.in_edges(0, data=True)) == [(1, 0, {"data": 1}), (2, 0, {})] |
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assert sorted(G.in_edges(0, data="data")) == [(1, 0, 1), (2, 0, None)] |
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assert sorted(G.in_edges(0, data="data", default=-1)) == [(1, 0, 1), (2, 0, -1)] |
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def is_shallow(self, H, G): |
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assert G.graph["foo"] == H.graph["foo"] |
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G.graph["foo"].append(1) |
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assert G.graph["foo"] == H.graph["foo"] |
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assert G.nodes[0]["foo"] == H.nodes[0]["foo"] |
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G.nodes[0]["foo"].append(1) |
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assert G.nodes[0]["foo"] == H.nodes[0]["foo"] |
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assert G[1][2][0]["foo"] == H[1][2][0]["foo"] |
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G[1][2][0]["foo"].append(1) |
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assert G[1][2][0]["foo"] == H[1][2][0]["foo"] |
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def is_deep(self, H, G): |
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assert G.graph["foo"] == H.graph["foo"] |
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G.graph["foo"].append(1) |
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assert G.graph["foo"] != H.graph["foo"] |
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assert G.nodes[0]["foo"] == H.nodes[0]["foo"] |
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G.nodes[0]["foo"].append(1) |
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assert G.nodes[0]["foo"] != H.nodes[0]["foo"] |
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assert G[1][2][0]["foo"] == H[1][2][0]["foo"] |
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G[1][2][0]["foo"].append(1) |
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assert G[1][2][0]["foo"] != H[1][2][0]["foo"] |
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def test_to_undirected(self): |
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G = self.K3 |
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self.add_attributes(G) |
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H = nx.MultiGraph(G) |
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try: |
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assert edges_equal(H.edges(), [(0, 1), (1, 2), (2, 0)]) |
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except AssertionError: |
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assert edges_equal(H.edges(), [(0, 1), (1, 2), (1, 2), (2, 0)]) |
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H = G.to_undirected() |
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self.is_deep(H, G) |
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def test_has_successor(self): |
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G = self.K3 |
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assert G.has_successor(0, 1) |
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assert not G.has_successor(0, -1) |
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def test_successors(self): |
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G = self.K3 |
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assert sorted(G.successors(0)) == [1, 2] |
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pytest.raises((KeyError, nx.NetworkXError), G.successors, -1) |
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def test_has_predecessor(self): |
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G = self.K3 |
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assert G.has_predecessor(0, 1) |
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assert not G.has_predecessor(0, -1) |
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def test_predecessors(self): |
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G = self.K3 |
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assert sorted(G.predecessors(0)) == [1, 2] |
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pytest.raises((KeyError, nx.NetworkXError), G.predecessors, -1) |
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def test_degree(self): |
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G = self.K3 |
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assert sorted(G.degree()) == [(0, 4), (1, 4), (2, 4)] |
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assert dict(G.degree()) == {0: 4, 1: 4, 2: 4} |
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assert G.degree(0) == 4 |
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assert list(G.degree(iter([0]))) == [(0, 4)] |
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G.add_edge(0, 1, weight=0.3, other=1.2) |
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assert sorted(G.degree(weight="weight")) == [(0, 4.3), (1, 4.3), (2, 4)] |
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assert sorted(G.degree(weight="other")) == [(0, 5.2), (1, 5.2), (2, 4)] |
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def test_in_degree(self): |
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G = self.K3 |
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assert sorted(G.in_degree()) == [(0, 2), (1, 2), (2, 2)] |
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assert dict(G.in_degree()) == {0: 2, 1: 2, 2: 2} |
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assert G.in_degree(0) == 2 |
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assert list(G.in_degree(iter([0]))) == [(0, 2)] |
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assert G.in_degree(0, weight="weight") == 2 |
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def test_out_degree(self): |
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G = self.K3 |
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assert sorted(G.out_degree()) == [(0, 2), (1, 2), (2, 2)] |
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assert dict(G.out_degree()) == {0: 2, 1: 2, 2: 2} |
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assert G.out_degree(0) == 2 |
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assert list(G.out_degree(iter([0]))) == [(0, 2)] |
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assert G.out_degree(0, weight="weight") == 2 |
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def test_size(self): |
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G = self.K3 |
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assert G.size() == 6 |
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assert G.number_of_edges() == 6 |
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G.add_edge(0, 1, weight=0.3, other=1.2) |
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assert round(G.size(weight="weight"), 2) == 6.3 |
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assert round(G.size(weight="other"), 2) == 7.2 |
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def test_to_undirected_reciprocal(self): |
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G = self.Graph() |
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G.add_edge(1, 2) |
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assert G.to_undirected().has_edge(1, 2) |
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assert not G.to_undirected(reciprocal=True).has_edge(1, 2) |
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G.add_edge(2, 1) |
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assert G.to_undirected(reciprocal=True).has_edge(1, 2) |
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def test_reverse_copy(self): |
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G = nx.MultiDiGraph([(0, 1), (0, 1)]) |
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R = G.reverse() |
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assert sorted(R.edges()) == [(1, 0), (1, 0)] |
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R.remove_edge(1, 0) |
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assert sorted(R.edges()) == [(1, 0)] |
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assert sorted(G.edges()) == [(0, 1), (0, 1)] |
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def test_reverse_nocopy(self): |
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G = nx.MultiDiGraph([(0, 1), (0, 1)]) |
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R = G.reverse(copy=False) |
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assert sorted(R.edges()) == [(1, 0), (1, 0)] |
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pytest.raises(nx.NetworkXError, R.remove_edge, 1, 0) |
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def test_di_attributes_cached(self): |
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G = self.K3.copy() |
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assert id(G.in_edges) == id(G.in_edges) |
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assert id(G.out_edges) == id(G.out_edges) |
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assert id(G.in_degree) == id(G.in_degree) |
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assert id(G.out_degree) == id(G.out_degree) |
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assert id(G.succ) == id(G.succ) |
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assert id(G.pred) == id(G.pred) |
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class TestMultiDiGraph(BaseMultiDiGraphTester, _TestMultiGraph): |
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def setup_method(self): |
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self.Graph = nx.MultiDiGraph |
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self.k3edges = [(0, 1), (0, 2), (1, 2)] |
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self.k3nodes = [0, 1, 2] |
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self.K3 = self.Graph() |
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self.K3._succ = {0: {}, 1: {}, 2: {}} |
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self.K3._pred = {0: {}, 1: {}, 2: {}} |
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for u in self.k3nodes: |
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for v in self.k3nodes: |
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if u == v: |
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continue |
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d = {0: {}} |
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self.K3._succ[u][v] = d |
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self.K3._pred[v][u] = d |
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self.K3._node = {} |
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self.K3._node[0] = {} |
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self.K3._node[1] = {} |
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self.K3._node[2] = {} |
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def test_add_edge(self): |
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G = self.Graph() |
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G.add_edge(0, 1) |
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assert G._adj == {0: {1: {0: {}}}, 1: {}} |
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assert G._succ == {0: {1: {0: {}}}, 1: {}} |
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assert G._pred == {0: {}, 1: {0: {0: {}}}} |
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G = self.Graph() |
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G.add_edge(*(0, 1)) |
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assert G._adj == {0: {1: {0: {}}}, 1: {}} |
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assert G._succ == {0: {1: {0: {}}}, 1: {}} |
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assert G._pred == {0: {}, 1: {0: {0: {}}}} |
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with pytest.raises(ValueError, match="None cannot be a node"): |
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G.add_edge(None, 3) |
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def test_add_edges_from(self): |
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G = self.Graph() |
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G.add_edges_from([(0, 1), (0, 1, {"weight": 3})]) |
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assert G._adj == {0: {1: {0: {}, 1: {"weight": 3}}}, 1: {}} |
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assert G._succ == {0: {1: {0: {}, 1: {"weight": 3}}}, 1: {}} |
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assert G._pred == {0: {}, 1: {0: {0: {}, 1: {"weight": 3}}}} |
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G.add_edges_from([(0, 1), (0, 1, {"weight": 3})], weight=2) |
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assert G._succ == { |
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0: {1: {0: {}, 1: {"weight": 3}, 2: {"weight": 2}, 3: {"weight": 3}}}, |
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1: {}, |
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} |
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assert G._pred == { |
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0: {}, |
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1: {0: {0: {}, 1: {"weight": 3}, 2: {"weight": 2}, 3: {"weight": 3}}}, |
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} |
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G = self.Graph() |
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edges = [ |
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(0, 1, {"weight": 3}), |
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(0, 1, (("weight", 2),)), |
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(0, 1, 5), |
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(0, 1, "s"), |
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] |
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G.add_edges_from(edges) |
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keydict = {0: {"weight": 3}, 1: {"weight": 2}, 5: {}, "s": {}} |
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assert G._succ == {0: {1: keydict}, 1: {}} |
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assert G._pred == {1: {0: keydict}, 0: {}} |
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pytest.raises(nx.NetworkXError, G.add_edges_from, [(0,)]) |
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pytest.raises(nx.NetworkXError, G.add_edges_from, [(0, 1, 2, 3, 4)]) |
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pytest.raises(TypeError, G.add_edges_from, [0]) |
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with pytest.raises(ValueError, match="None cannot be a node"): |
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G.add_edges_from([(None, 3), (3, 2)]) |
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def test_remove_edge(self): |
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G = self.K3 |
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G.remove_edge(0, 1) |
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assert G._succ == { |
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0: {2: {0: {}}}, |
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1: {0: {0: {}}, 2: {0: {}}}, |
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2: {0: {0: {}}, 1: {0: {}}}, |
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} |
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assert G._pred == { |
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0: {1: {0: {}}, 2: {0: {}}}, |
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1: {2: {0: {}}}, |
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2: {0: {0: {}}, 1: {0: {}}}, |
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} |
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pytest.raises((KeyError, nx.NetworkXError), G.remove_edge, -1, 0) |
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pytest.raises((KeyError, nx.NetworkXError), G.remove_edge, 0, 2, key=1) |
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def test_remove_multiedge(self): |
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G = self.K3 |
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G.add_edge(0, 1, key="parallel edge") |
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G.remove_edge(0, 1, key="parallel edge") |
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assert G._adj == { |
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0: {1: {0: {}}, 2: {0: {}}}, |
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1: {0: {0: {}}, 2: {0: {}}}, |
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2: {0: {0: {}}, 1: {0: {}}}, |
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} |
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assert G._succ == { |
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0: {1: {0: {}}, 2: {0: {}}}, |
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1: {0: {0: {}}, 2: {0: {}}}, |
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2: {0: {0: {}}, 1: {0: {}}}, |
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} |
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assert G._pred == { |
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0: {1: {0: {}}, 2: {0: {}}}, |
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1: {0: {0: {}}, 2: {0: {}}}, |
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2: {0: {0: {}}, 1: {0: {}}}, |
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} |
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G.remove_edge(0, 1) |
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assert G._succ == { |
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0: {2: {0: {}}}, |
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1: {0: {0: {}}, 2: {0: {}}}, |
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2: {0: {0: {}}, 1: {0: {}}}, |
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} |
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assert G._pred == { |
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0: {1: {0: {}}, 2: {0: {}}}, |
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1: {2: {0: {}}}, |
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2: {0: {0: {}}, 1: {0: {}}}, |
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} |
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pytest.raises((KeyError, nx.NetworkXError), G.remove_edge, -1, 0) |
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def test_remove_edges_from(self): |
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G = self.K3 |
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G.remove_edges_from([(0, 1)]) |
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assert G._succ == { |
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0: {2: {0: {}}}, |
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1: {0: {0: {}}, 2: {0: {}}}, |
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2: {0: {0: {}}, 1: {0: {}}}, |
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} |
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assert G._pred == { |
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0: {1: {0: {}}, 2: {0: {}}}, |
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1: {2: {0: {}}}, |
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2: {0: {0: {}}, 1: {0: {}}}, |
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} |
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G.remove_edges_from([(0, 0)]) |
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class TestEdgeSubgraph(_TestMultiGraphEdgeSubgraph): |
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"""Unit tests for the :meth:`MultiDiGraph.edge_subgraph` method.""" |
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def setup_method(self): |
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G = nx.MultiDiGraph() |
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nx.add_path(G, range(5)) |
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nx.add_path(G, range(5)) |
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nx.add_path(G, reversed(range(5))) |
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nx.add_path(G, reversed(range(5))) |
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for i in range(5): |
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G.nodes[i]["name"] = f"node{i}" |
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G.adj[0][1][0]["name"] = "edge010" |
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G.adj[0][1][1]["name"] = "edge011" |
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G.adj[3][4][0]["name"] = "edge340" |
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G.adj[3][4][1]["name"] = "edge341" |
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G.graph["name"] = "graph" |
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|
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self.G = G |
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self.H = G.edge_subgraph([(0, 1, 0), (3, 4, 1)]) |
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class CustomDictClass(UserDict): |
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pass |
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class MultiDiGraphSubClass(nx.MultiDiGraph): |
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node_dict_factory = CustomDictClass |
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node_attr_dict_factory = CustomDictClass |
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adjlist_outer_dict_factory = CustomDictClass |
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adjlist_inner_dict_factory = CustomDictClass |
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edge_key_dict_factory = CustomDictClass |
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edge_attr_dict_factory = CustomDictClass |
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graph_attr_dict_factory = CustomDictClass |
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|
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class TestMultiDiGraphSubclass(TestMultiDiGraph): |
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def setup_method(self): |
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self.Graph = MultiDiGraphSubClass |
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|
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self.k3edges = [(0, 1), (0, 2), (1, 2)] |
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self.k3nodes = [0, 1, 2] |
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self.K3 = self.Graph() |
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self.K3._succ = self.K3.adjlist_outer_dict_factory( |
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{ |
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0: self.K3.adjlist_inner_dict_factory(), |
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1: self.K3.adjlist_inner_dict_factory(), |
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2: self.K3.adjlist_inner_dict_factory(), |
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} |
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) |
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|
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self.K3._pred = {0: {}, 1: {}, 2: {}} |
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for u in self.k3nodes: |
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for v in self.k3nodes: |
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if u == v: |
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continue |
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d = {0: {}} |
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|
self.K3._succ[u][v] = d |
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self.K3._pred[v][u] = d |
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self.K3._node = self.K3.node_dict_factory() |
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self.K3._node[0] = self.K3.node_attr_dict_factory() |
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self.K3._node[1] = self.K3.node_attr_dict_factory() |
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self.K3._node[2] = self.K3.node_attr_dict_factory() |
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|