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| try: |
| import pandas as pd |
| except ImportError: |
| print("Please install the pandas package with 'pip install pandas' and try again.") |
| exit(1) |
|
|
| import argparse |
|
|
| _VERSION = "1.01" |
|
|
| class ExplicitDefaultsHelpFormatter(argparse.ArgumentDefaultsHelpFormatter): |
| def _get_help_string(self, action): |
| if action.default is None or action.default is False: |
| return action.help |
| return super()._get_help_string(action) |
|
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| |
| |
| |
| maxN = 5 |
|
|
| def findHall(wrd): |
| for N in range(maxN, 0, -1): |
| count = 0 |
| for idx in range(0,len(wrd)-2*N+2): |
| |
| |
| count += hallLen(idx,N,wrd) |
| if ( N<3 and count+1>=parsed_args.thresh1grams ) or \ |
| ( N>=3 and count+1>=parsed_args.threshNgrams ): |
| return [N, idx, count] |
| else: |
| count = 0 |
| |
| return [0,0,0] |
|
|
| def hallLen(startIdx,N,wrd): |
| hallLen = 0 |
| startRep = startIdx + N |
| while startRep < len(wrd)-N+1: |
| if isHall(startIdx,startRep,N,wrd): |
| hallLen+=1 |
| startRep+=N |
| else: |
| break |
| return hallLen |
|
|
| def isHall(s1,s2,N,wrd): |
| i = 0 |
| while i<N and wrd[s1+i] == wrd[s2+i]: |
| i+=1 |
| return i == N |
| |
| def main(args): |
| """ |
| This script flags (by setting True the corresponding entry |
| of the hall_repeated_ngrams column) those sentences where a |
| pattern (n-gram, that is a sequence of n words) is repeated |
| at least a given number of times; for patterns of size 1 to 2, |
| the minimum number of times for flagging it is set by the |
| thresh1grams parameter (default value: 4), for those of size |
| 3-5 by threshNgrams (2) |
| """ |
|
|
| if (parsed_args.version): |
| print(f"Version {_VERSION} of anomalous string detector") |
| exit(1) |
|
|
| if not (tsv_files_specified): |
| print("--tsv-InFile and --tsv-OutFile are both required") |
| parser.print_usage() |
| exit(1) |
|
|
| if not (wrong_thresh_values): |
| print("--thresh1grams and --threshNgrams must both be positive integers") |
| parser.print_usage() |
| exit(1) |
|
|
| try: |
| inDF = pd.read_csv(args.tsv_InFile, sep='\t', dtype=str, low_memory=False, na_filter=False, quoting=3) |
| except IOError: |
| print("Error in opening "+args.tsv_InFile+" file") |
|
|
| try: |
| txt = inDF[parsed_args.column] |
| except KeyError: |
| print("Error in reading column <"+parsed_args.column+"> in TSV file") |
| exit(1) |
|
|
| flag = [] |
| for line in txt: |
| words = line.split() |
| [size, idx, count] = findHall(words) |
| if size>0: |
| if args.quiet: |
| flag.append("True") |
| else: |
| flag.append("True (pattern of length " + str(size) + \ |
| " from index " + str(idx) + \ |
| ", repeated at least " + str(count+1) + " times)") |
| else: |
| flag.append("False") |
|
|
| inDF['hall_repeated_ngrams'] = flag |
| inDF.to_csv(args.tsv_OutFile, sep="\t", index=False, quoting=3) |
|
|
|
|
| if __name__ == '__main__': |
| parser = argparse.ArgumentParser(formatter_class=ExplicitDefaultsHelpFormatter) |
|
|
| |
| parser.add_argument( |
| '--tsv-InFile', '-i', type=str, |
| help="The input TSV file [Mandatory]") |
|
|
| parser.add_argument( |
| '--tsv-OutFile', '-o', type=str, |
| help="The output TSV file [Mandatory. If equal to input TSV file, the new column is added to the original file]") |
|
|
| |
| parser.add_argument( |
| '--column', '-c', default='source', |
| help="Column name of the text to process [Optional]") |
| |
| parser.add_argument( |
| '--thresh1grams', '-u', type=int, default=4, |
| help="Threshold for 1-2_word hallucinations [Optional]") |
|
|
| parser.add_argument( |
| '--threshNgrams', '-n', type=int, default=2, |
| help="Threshold for 3-5_word hallucinations [Optional]") |
|
|
| |
| parser.add_argument( |
| '--quiet', '-q', default=False, action='store_true', |
| help='Print only True/False, no explanation for True\'s') |
|
|
| |
| parser.add_argument( |
| '--version', '-v', action='store_true', default=False, |
| help="Print version of the script and exit") |
|
|
| |
| parsed_args = parser.parse_args() |
| tsv_files_specified = \ |
| getattr(parsed_args, 'tsv_InFile') is not None \ |
| and len(parsed_args.tsv_InFile) > 0 \ |
| and getattr(parsed_args, 'tsv_OutFile') is not None \ |
| and len(parsed_args.tsv_OutFile) > 0 |
|
|
| wrong_thresh_values = parsed_args.thresh1grams > 0 \ |
| and parsed_args.threshNgrams > 0 |
| |
| |
| main(parsed_args) |
|
|