Datasets:
Add files using upload-large-folder tool
Browse files- 100k/edges.parquet +3 -0
- 100k/nodes.parquet +3 -0
- 10k/edges.parquet +3 -0
- 10k/nodes.parquet +3 -0
- 10m/edges.parquet +3 -0
- 10m/nodes.parquet +3 -0
- 1k/edges.parquet +3 -0
- 1k/nodes.parquet +3 -0
- 1m/edges.parquet +3 -0
- 1m/nodes.parquet +3 -0
- README.md +231 -3
- raw/cs100k_openalex.db.zip +3 -0
- raw/cs10k_openalex.db.zip +3 -0
- raw/cs10m_openalex.db.zip +3 -0
- raw/cs1k_openalex.db.zip +3 -0
- raw/cs1m_openalex.db.zip +3 -0
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10k/edges.parquet
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1m/edges.parquet
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README.md
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-
---
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license: cc-by-sa-4.0
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-
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| 1 |
+
---
|
| 2 |
+
license: cc-by-sa-4.0
|
| 3 |
+
language:
|
| 4 |
+
- en
|
| 5 |
+
pretty_name: CS Knowledge Graph (OpenAlex)
|
| 6 |
+
size_categories:
|
| 7 |
+
- 10M<n<100M
|
| 8 |
+
task_categories:
|
| 9 |
+
- graph-ml
|
| 10 |
+
- feature-extraction
|
| 11 |
+
tags:
|
| 12 |
+
- knowledge-graph
|
| 13 |
+
- openalex
|
| 14 |
+
- computer-science
|
| 15 |
+
- bibliographic
|
| 16 |
+
- citation-network
|
| 17 |
+
- co-authorship
|
| 18 |
+
- scholarly
|
| 19 |
+
- link-prediction
|
| 20 |
+
- node-classification
|
| 21 |
+
configs:
|
| 22 |
+
- config_name: 1k
|
| 23 |
+
data_files:
|
| 24 |
+
- split: nodes
|
| 25 |
+
path: 1k/nodes.parquet
|
| 26 |
+
- split: edges
|
| 27 |
+
path: 1k/edges.parquet
|
| 28 |
+
- config_name: 10k
|
| 29 |
+
data_files:
|
| 30 |
+
- split: nodes
|
| 31 |
+
path: 10k/nodes.parquet
|
| 32 |
+
- split: edges
|
| 33 |
+
path: 10k/edges.parquet
|
| 34 |
+
- config_name: 100k
|
| 35 |
+
data_files:
|
| 36 |
+
- split: nodes
|
| 37 |
+
path: 100k/nodes.parquet
|
| 38 |
+
- split: edges
|
| 39 |
+
path: 100k/edges.parquet
|
| 40 |
+
- config_name: 1m
|
| 41 |
+
data_files:
|
| 42 |
+
- split: nodes
|
| 43 |
+
path: 1m/nodes.parquet
|
| 44 |
+
- split: edges
|
| 45 |
+
path: 1m/edges.parquet
|
| 46 |
+
- config_name: 10m
|
| 47 |
+
data_files:
|
| 48 |
+
- split: nodes
|
| 49 |
+
path: 10m/nodes.parquet
|
| 50 |
+
- split: edges
|
| 51 |
+
path: 10m/edges.parquet
|
| 52 |
+
---
|
| 53 |
+
|
| 54 |
+
# CS Knowledge Graph Dataset (OpenAlex)
|
| 55 |
+
|
| 56 |
+
A multi-scale heterogeneous knowledge graph of Computer Science scholarly data,
|
| 57 |
+
built from [OpenAlex](https://openalex.org). Each scale is an independent,
|
| 58 |
+
self-contained subgraph centered on Computer Science papers, their authors,
|
| 59 |
+
publication venues, and concept tags, plus the relationships between them.
|
| 60 |
+
|
| 61 |
+
The dataset is intended for research on knowledge graph embeddings, link
|
| 62 |
+
prediction, node classification, scholarly recommendation, and graph neural
|
| 63 |
+
networks at varying scales of compute.
|
| 64 |
+
|
| 65 |
+
## Scales
|
| 66 |
+
|
| 67 |
+
Five scales are provided so the same pipeline can be benchmarked from quick
|
| 68 |
+
prototyping (1k) to large-scale training (10m). Each scale is a strict superset
|
| 69 |
+
of the smaller ones in spirit, but is sampled independently — treat them as
|
| 70 |
+
five separate graphs rather than nested cuts.
|
| 71 |
+
|
| 72 |
+
| Config | Nodes | Edges | Parquet size | Raw SQLite (zip) |
|
| 73 |
+
|--------|-----------:|------------:|-------------:|-----------------:|
|
| 74 |
+
| `1k` | 5,237 | 32,655 | 277 KB | 961 KB |
|
| 75 |
+
| `10k` | 44,933 | 252,631 | 2.0 MB | 7.7 MB |
|
| 76 |
+
| `100k` | 348,983 | 2,162,386 | 16 MB | 68 MB |
|
| 77 |
+
| `1m` | 2,384,896 | 13,530,177 | 117 MB | 597 MB |
|
| 78 |
+
| `10m` | 7,210,506 | 44,631,484 | 384 MB | 2.1 GB |
|
| 79 |
+
|
| 80 |
+
## Schema
|
| 81 |
+
|
| 82 |
+
Each config has two splits, named `nodes` and `edges` (rather than the usual
|
| 83 |
+
train/test/validation, since this is a graph dataset).
|
| 84 |
+
|
| 85 |
+
### `nodes` split
|
| 86 |
+
|
| 87 |
+
| Column | Type | Description |
|
| 88 |
+
|--------------|--------|-----------------------------------------------------------------------|
|
| 89 |
+
| `node_id` | string | Unique node identifier, prefixed by type (e.g. `paper_W2604738573`). |
|
| 90 |
+
| `node_name` | string | Human-readable name (paper title, author display name, venue, etc.). |
|
| 91 |
+
| `node_type` | string | One of `Paper`, `Author`, `Venue`, `Concept`. |
|
| 92 |
+
| `attributes` | string | Type-specific attributes encoded as a JSON string (see below). |
|
| 93 |
+
|
| 94 |
+
The `attributes` JSON object has different keys depending on `node_type`:
|
| 95 |
+
|
| 96 |
+
- **Paper**: `year` (int), `citation_count` (int), `venue` (string), `type` (string, e.g. `article`)
|
| 97 |
+
- **Author**: `h_index` (int or null), `citation_count` (int or null), `works_count` (int or null), `institution` (string)
|
| 98 |
+
- **Venue**: `type` (string, e.g. `journal`, `conference`), `publisher` (string)
|
| 99 |
+
- **Concept**: `domain` (string, e.g. `CS`)
|
| 100 |
+
|
| 101 |
+
### `edges` split
|
| 102 |
+
|
| 103 |
+
| Column | Type | Description |
|
| 104 |
+
|------------|--------|--------------------------------------------------------------------------------------------|
|
| 105 |
+
| `source` | string | `node_id` of the source node. |
|
| 106 |
+
| `relation` | string | One of `AUTHORED`, `CITES`, `PUBLISHED_IN`, `BELONGS_TO`, `COLLABORATES_WITH`. |
|
| 107 |
+
| `target` | string | `node_id` of the target node. |
|
| 108 |
+
| `year` | float | Year associated with the edge when applicable (e.g. publication year); `null` otherwise. |
|
| 109 |
+
|
| 110 |
+
Relation semantics:
|
| 111 |
+
|
| 112 |
+
- `AUTHORED` — `Author → Paper`
|
| 113 |
+
- `CITES` — `Paper → Paper`
|
| 114 |
+
- `PUBLISHED_IN` — `Paper → Venue`
|
| 115 |
+
- `BELONGS_TO` — `Paper → Concept`
|
| 116 |
+
- `COLLABORATES_WITH` — `Author → Author` (co-authorship; symmetric, may appear in both directions)
|
| 117 |
+
|
| 118 |
+
## Usage
|
| 119 |
+
|
| 120 |
+
### Load with the `datasets` library
|
| 121 |
+
|
| 122 |
+
```python
|
| 123 |
+
from datasets import load_dataset
|
| 124 |
+
|
| 125 |
+
# Pick a scale: "1k", "10k", "100k", "1m", or "10m"
|
| 126 |
+
nodes = load_dataset("jugalgajjar/CS-Knowledge-Graph-Dataset", "10k", split="nodes")
|
| 127 |
+
edges = load_dataset("jugalgajjar/CS-Knowledge-Graph-Dataset", "10k", split="edges")
|
| 128 |
+
|
| 129 |
+
print(nodes[0])
|
| 130 |
+
# {'node_id': 'paper_W...', 'node_name': '...', 'node_type': 'Paper',
|
| 131 |
+
# 'attributes': '{"year": 2016, "citation_count": 1816, ...}'}
|
| 132 |
+
|
| 133 |
+
import json
|
| 134 |
+
attrs = json.loads(nodes[0]["attributes"])
|
| 135 |
+
```
|
| 136 |
+
|
| 137 |
+
### Load directly with pandas / pyarrow
|
| 138 |
+
|
| 139 |
+
```python
|
| 140 |
+
import pandas as pd
|
| 141 |
+
nodes = pd.read_parquet("hf://datasets/jugalgajjar/CS-Knowledge-Graph-Dataset/100k/nodes.parquet")
|
| 142 |
+
edges = pd.read_parquet("hf://datasets/jugalgajjar/CS-Knowledge-Graph-Dataset/100k/edges.parquet")
|
| 143 |
+
```
|
| 144 |
+
|
| 145 |
+
### Build a PyTorch Geometric graph
|
| 146 |
+
|
| 147 |
+
```python
|
| 148 |
+
import json
|
| 149 |
+
import torch
|
| 150 |
+
from torch_geometric.data import HeteroData
|
| 151 |
+
from datasets import load_dataset
|
| 152 |
+
|
| 153 |
+
scale = "10k"
|
| 154 |
+
nodes = load_dataset("jugalgajjar/CS-Knowledge-Graph-Dataset", scale, split="nodes").to_pandas()
|
| 155 |
+
edges = load_dataset("jugalgajjar/CS-Knowledge-Graph-Dataset", scale, split="edges").to_pandas()
|
| 156 |
+
|
| 157 |
+
data = HeteroData()
|
| 158 |
+
id_maps = {}
|
| 159 |
+
for ntype, group in nodes.groupby("node_type"):
|
| 160 |
+
ids = group["node_id"].tolist()
|
| 161 |
+
id_maps[ntype] = {nid: i for i, nid in enumerate(ids)}
|
| 162 |
+
data[ntype].num_nodes = len(ids)
|
| 163 |
+
|
| 164 |
+
# infer source/target type from the node_id prefix
|
| 165 |
+
type_from_prefix = {"paper": "Paper", "author": "Author", "venue": "Venue", "concept": "Concept"}
|
| 166 |
+
def ntype_of(nid: str) -> str:
|
| 167 |
+
return type_from_prefix[nid.split("_", 1)[0]]
|
| 168 |
+
|
| 169 |
+
for relation, group in edges.groupby("relation"):
|
| 170 |
+
src_type = ntype_of(group["source"].iloc[0])
|
| 171 |
+
dst_type = ntype_of(group["target"].iloc[0])
|
| 172 |
+
src = group["source"].map(id_maps[src_type]).to_numpy()
|
| 173 |
+
dst = group["target"].map(id_maps[dst_type]).to_numpy()
|
| 174 |
+
data[src_type, relation, dst_type].edge_index = torch.tensor([src, dst], dtype=torch.long)
|
| 175 |
+
```
|
| 176 |
+
|
| 177 |
+
## Raw SQLite databases
|
| 178 |
+
|
| 179 |
+
In addition to the Parquet files, the original SQLite databases used to build
|
| 180 |
+
each scale are available under `raw/`:
|
| 181 |
+
|
| 182 |
+
```
|
| 183 |
+
raw/cs1k_openalex.db.zip
|
| 184 |
+
raw/cs10k_openalex.db.zip
|
| 185 |
+
raw/cs100k_openalex.db.zip
|
| 186 |
+
raw/cs1m_openalex.db.zip
|
| 187 |
+
raw/cs10m_openalex.db.zip
|
| 188 |
+
```
|
| 189 |
+
|
| 190 |
+
These are useful if you want to run SQL queries over the source records
|
| 191 |
+
directly. Download with `huggingface_hub`:
|
| 192 |
+
|
| 193 |
+
```python
|
| 194 |
+
from huggingface_hub import hf_hub_download
|
| 195 |
+
path = hf_hub_download(
|
| 196 |
+
repo_id="jugalgajjar/CS-Knowledge-Graph-Dataset",
|
| 197 |
+
repo_type="dataset",
|
| 198 |
+
filename="raw/cs10k_openalex.db.zip",
|
| 199 |
+
)
|
| 200 |
+
```
|
| 201 |
+
|
| 202 |
+
## Source and licensing
|
| 203 |
+
|
| 204 |
+
- **Source data:** [OpenAlex](https://openalex.org), released into the public
|
| 205 |
+
domain under [CC0](https://creativecommons.org/publicdomain/zero/1.0/).
|
| 206 |
+
- **This derived dataset:** licensed under
|
| 207 |
+
[CC BY-SA 4.0](https://creativecommons.org/licenses/by-sa/4.0/). You may use,
|
| 208 |
+
modify, and redistribute it, including commercially, provided you give
|
| 209 |
+
attribution and license your derivative works under the same terms.
|
| 210 |
+
- Please also cite OpenAlex when using this dataset; see their
|
| 211 |
+
[citation guidance](https://docs.openalex.org).
|
| 212 |
+
|
| 213 |
+
## Repository layout
|
| 214 |
+
|
| 215 |
+
```
|
| 216 |
+
.
|
| 217 |
+
├── README.md
|
| 218 |
+
├── 1k/
|
| 219 |
+
│ ├── nodes.parquet
|
| 220 |
+
│ └── edges.parquet
|
| 221 |
+
├── 10k/ (same layout)
|
| 222 |
+
├── 100k/ (same layout)
|
| 223 |
+
├── 1m/ (same layout)
|
| 224 |
+
├── 10m/ (same layout)
|
| 225 |
+
└── raw/
|
| 226 |
+
├── cs1k_openalex.db.zip
|
| 227 |
+
├── cs10k_openalex.db.zip
|
| 228 |
+
├── cs100k_openalex.db.zip
|
| 229 |
+
├── cs1m_openalex.db.zip
|
| 230 |
+
└── cs10m_openalex.db.zip
|
| 231 |
+
```
|
raw/cs100k_openalex.db.zip
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:d8515539cde1286136adfe7aebf3276fb4bb9b759095a1b90352e382a2ff3362
|
| 3 |
+
size 70912197
|
raw/cs10k_openalex.db.zip
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:d17a2d479cfc7bda5b85b0c6de59c52e31728bbccca94a26170873380d6e9285
|
| 3 |
+
size 8028870
|
raw/cs10m_openalex.db.zip
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:cfb809befe708f3d2ad484ad0df7726890ec775b5485620ab21c0cc84576fc2d
|
| 3 |
+
size 2241407116
|
raw/cs1k_openalex.db.zip
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:5ec923599cd0f550b2f363d687095b5790c4aeaaac9229950bb54a6af4782cfe
|
| 3 |
+
size 984101
|
raw/cs1m_openalex.db.zip
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:591753a02f368d0502e379369493982383dab256559f4712d35641dc5075a5d0
|
| 3 |
+
size 626268613
|