Commit History

fix: Gradio examples format for additional_inputs
f66a862

VibecoderMcSwaggins commited on

chore: update README to specify Python version as 3.11 (#26)
5d9e8aa
unverified

VibecoderMcSwaggins commited on

fix: update requirements.txt for HuggingFace Spaces build
ee048f1

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chore: include coverage in make check for better DevEx
85d55c2

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chore: improve DevEx and clean up obsolete docs (#25)
f632ba8
unverified

VibecoderMcSwaggins commited on

Merge pull request #24 from The-Obstacle-Is-The-Way/fix/research-report-references-default
6dccda9
unverified

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style: add pytest.mark.unit to test_models (CodeRabbit)
6af8268

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fix: make ResearchReport.references optional with default
f882609

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Merge pull request #22 from The-Obstacle-Is-The-Way/feat/phase14-demo-submission
13be9d7
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Merge pull request #21 from The-Obstacle-Is-The-Way/feat/phase13-modal-integration
de588e7
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Merge branch 'main' into feat/phase13-modal-integration
71665e5

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docs: sync AI agent context files and fix final nitpicks
8bac750

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refactor: address CodeRabbit nitpick suggestions
901acc3

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fix: address CodeRabbit review feedback for Phase 13
f32a2ca

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docs: add AI agent context files for team collaboration
acdce61

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docs: add AI agent context files for team collaboration
5e7604a

VibecoderMcSwaggins commited on

fix: wire analyze_hypothesis MCP tool into Gradio app
521d97d

VibecoderMcSwaggins commited on

feat: implement phase 13 modal pipeline integration
7cc8b69

VibecoderMcSwaggins commited on

Merge pull request #20 from The-Obstacle-Is-The-Way/feat/phase12-mcp-server
5264b25
unverified

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docs: address CodeRabbit feedback for Phase 12 PR
f9cb2b7

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docs: update MCP server integration documentation and status
cde8f48

VibecoderMcSwaggins commited on

feat: enhance Gradio UI with MCP server support and new tool interfaces
10e234c

VibecoderMcSwaggins commited on

feat: add MCP tool wrappers for biomedical search tools
c114650

VibecoderMcSwaggins commited on

chore: update Gradio dependency to include MCP extras and version bump
f5b2917

VibecoderMcSwaggins commited on

docs: enhance Phase 13 Modal integration documentation
0d84878

VibecoderMcSwaggins commited on

docs: add Phase 14 Demo Video & Hackathon Submission specification
e16b9e6

VibecoderMcSwaggins commited on

docs: add Phase 12 MCP Server Integration specification
dd587c9

VibecoderMcSwaggins commited on

docs: add comprehensive hackathon documentation and integration plans
7b20f5d

VibecoderMcSwaggins commited on

feat: Phase 11 bioRxiv Preprint Integration (#19)
e67c99f
unverified

VibecoderMcSwaggins commited on

Merge pull request #16 from The-Obstacle-Is-The-Way/feat/mario-integration
31809fa
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refactor: centralize embedding configuration in Settings
20c7bad

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fix(rag): address remaining CodeRabbit feedback
2f0030b

VibecoderMcSwaggins commited on

refactor: address CodeRabbit review feedback for Mario integration
cbd94a4

VibecoderMcSwaggins commited on

fix(rag): use get_content() for BaseNode compatibility
3f90da8

VibecoderMcSwaggins commited on

fix(rag): apply lazy imports and use centralized config
055a3a7

VibecoderMcSwaggins commited on

feat: Integrate Mario's Modal code execution + LlamaIndex RAG
3aa91e9

VibecoderMcSwaggins Mario commited on

Merge pull request #15 from The-Obstacle-Is-The-Way/feat/phase10-clinicaltrials
17bd211
unverified

VibecoderMcSwaggins commited on

refactor: address CodeRabbit nitpicks for Phase 10
1bc9785

VibecoderMcSwaggins commited on

chore: Update httpx dependency and remove unused extras in pyproject.toml and uv.lock
1efef06

VibecoderMcSwaggins commited on

feat: Implement Phase 10 (ClinicalTrials.gov) with requests
4e2ccbf

VibecoderMcSwaggins commited on

feat: Complete Phase 9 Source Cleanup (Remove WebTool) (#14)
cd004e1

VibecoderMcSwaggins commited on

feat(docs): update implementation roadmap and add specs for Phases 9-11
3fcd8e7

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Merge pull request #13 from The-Obstacle-Is-The-Way/dev
388cd05

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fix(report): add explicit JSON structure guidance in prompt
d01e70d

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refactor(examples): apply CodeRabbit feedback (validations, complexity, formatting)
cd11dad

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refactor(examples): purge all mocks - real API calls only
cfb473d

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