Error code:   ConfigNamesError
Exception:    RuntimeError
Message:      Dataset scripts are no longer supported, but found medical_wikipedia.py
Traceback:    Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/dataset/config_names.py", line 66, in compute_config_names_response
                  config_names = get_dataset_config_names(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/inspect.py", line 161, in get_dataset_config_names
                  dataset_module = dataset_module_factory(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/load.py", line 1031, in dataset_module_factory
                  raise e1 from None
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/load.py", line 989, in dataset_module_factory
                  raise RuntimeError(f"Dataset scripts are no longer supported, but found {filename}")
              RuntimeError: Dataset scripts are no longer supported, but found medical_wikipedia.py

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MedWiki from ClinicalCorp

This repo generates on-the-fly a filtered version of the Cohere/wikipedia-22-12 on medical topic articles based on MaartenGr/BERTopic_Wikipedia. DISCLAIMER: there is no data in this repo only scripts to build it, the trust_remote_code=True flag must be set.

Original Dataset

https://huggingface.co/datasets/Cohere/wikipedia-22-12

Topic modelling

https://huggingface.co/MaartenGr/BERTopic_Wikipedia

Topics from this model were classified as part of the medical field by prompting GPT3.5-turbo 0613 over word representations of topics. The original topic list can be obtained from the topic model.

Citation

@article{corbeil2024iryonlp,
  title={IryoNLP at MEDIQA-CORR 2024: Tackling the Medical Error Detection & Correction Task On the Shoulders of Medical Agents},
  author={Jean-Philippe Corbeil},
  journal={arXiv preprint arXiv:2404.15488},
  year={2024}
}

Disclaimer

There will be no updates.

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Models trained or fine-tuned on jpcorb20/medical_wikipedia