Dataset Viewer
Auto-converted to Parquet Duplicate
Search is not available for this dataset
The dataset viewer is not available for this split.
Parquet error: Scan size limit exceeded: attempted to read 393032799 bytes, limit is 300000000 bytes Make sure that 1. the Parquet files contain a page index to enable random access without loading entire row groups2. otherwise use smaller row-group sizes when serializing the Parquet files
Error code:   TooBigContentError

Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.

CETUS — Cardiac Echo Training and Ultrasound Segmentation

Description

The CETUS dataset contains 45 patients of real 3D echocardiography volumes acquired at two cardiac phases:

  • End-Diastole (ED)patientXX_ED.nii.gz
  • End-Systole (ES)patientXX_ES.nii.gz

Ground-truth left-ventricular segmentation masks are provided as patientXX_ED_gt.nii.gz and patientXX_ES_gt.nii.gz.

File Structure

dataset/
  patient01/
    patient01_ED.nii.gz
    patient01_ED_gt.nii.gz
    patient01_ES.nii.gz
    patient01_ES_gt.nii.gz
  patient02/
    ...
  ...
  patient45/
    ...
  LICENSE_TERMS.md
  MANDATORY_CITATION.md
jupyter/
  script_cetus.ipynb
  LICENSE_TERMS.md
  MANDATORY_CITATION.md
Resources.zip

Format

  • Volume format: NIfTI (.nii.gz)
  • Typical shape: varies per patient (see metadata in NIfTI headers)

Usage

import SimpleITK as sitk

img = sitk.ReadImage("dataset/patient01/patient01_ED.nii.gz")
volume = sitk.GetArrayFromImage(img)  # shape: (Z, Y, X)
print(f"Shape: {volume.shape}, dtype: {volume.dtype}")

Source

Original dataset page: https://www.creatis.insa-lyon.fr/Challenge/CETUS/databases.html

License

CC BY-NC-SA 4.0 — free for non-commercial scientific research only.

Downloads last month
8