Datasets:

turmex2
/

pgc-adhd

CHR int64 1 22	SNP large_stringlengths 1 11	BP int64 12k 249M	A1 large_stringclasses 5 values	A2 large_stringclasses 4 values	FRQ_A_38691 float64 0.01 0.99	FRQ_U_186843 float64 0.01 0.99	INFO float64 0.8 1.02	OR float64 0.81 1.31	SE float64 0.01 0.08	P float64 0 1	Direction large_stringlengths 10 13	Nca int64 16.6k 38.7k	Nco int64 37.7k 276k
8	rs62513865	101,592,213	C	T	0.925	0.937	0.981	0.99631	0.0175	0.8325	+---+++0-++-+	38,691	186,843
8	rs79643588	106,973,048	G	A	0.91	0.917	1	1.00411	0.0159	0.7967	++--++-+-+-++	38,691	186,843
8	rs17396518	108,690,829	T	G	0.561	0.577	0.998	0.99611	0.0096	0.6876	--++-++??-+--	37,367	184,388
8	rs983166	108,681,675	A	C	0.57	0.586	0.996	0.99491	0.0096	0.5956	--++-++++-+--	38,691	186,843
8	rs28842593	103,044,620	T	C	0.839	0.836	0.982	0.98314	0.0135	0.2081	----++0+??--+	37,504	184,525
8	rs7014597	104,152,280	G	C	0.824	0.824	0.997	0.9995	0.0122	0.9679	+-++-+++++---	38,691	186,843
8	rs3134156	100,479,917	T	C	0.841	0.833	0.997	0.98866	0.0128	0.3762	-+----+--++--	38,691	186,843
8	rs6980591	103,144,592	A	C	0.783	0.79	1	1.01106	0.0108	0.3075	++-++---+++++	38,691	186,843
8	rs72670434	108,166,508	A	T	0.642	0.623	0.983	1.00672	0.0103	0.5171	+++-+++--+++-	38,691	186,843
8	rs10955343	105,201,080	C	T	0.639	0.646	0.997	0.97346	0.0097	0.005442	+++++++-+++-+	38,691	186,843
8	rs74749112	109,964,318	G	A	0.964	0.96	0.999	1.0008	0.0264	0.9767	+----++-+-+++	38,691	186,843
8	rs4734443	101,012,421	C	T	0.577	0.578	0.99	0.9998	0.0094	0.9858	+--++--+-++++	38,691	186,843
8	rs2436965	103,650,415	A	G	0.133	0.125	0.996	1.02163	0.014	0.1269	++-+++++--+-+	38,691	186,843
8	rs427145	109,224,500	A	G	0.244	0.235	0.994	0.98069	0.0107	0.06738	------++---+-	38,691	186,843
8	rs7838119	101,644,243	G	A	0.897	0.907	0.999	0.99035	0.0148	0.509	++-+--+-++--+	38,691	186,843
8	rs4448250	107,978,035	T	C	0.255	0.267	0.997	1.01603	0.0106	0.1358	++--+++++-++-	38,691	186,843
8	rs2441902	105,208,527	G	A	0.33	0.346	0.998	0.97658	0.0099	0.01651	++++++++-+++-	38,691	186,843
8	rs34397009	106,490,696	C	G	0.873	0.879	0.978	1.01167	0.014	0.4056	++++-+++-+---	38,691	186,843
8	rs11986967	101,360,616	T	C	0.849	0.858	0.999	1.00431	0.0127	0.7352	-+-++--+++++-	38,691	186,843
8	rs118006969	105,707,805	G	A	0.984	0.983	0.93	0.94639	0.044	0.2107	++?++?-+--?++	29,729	48,316
8	rs9297348	105,710,019	T	C	0.763	0.773	0.998	1.0142	0.0107	0.1891	+++++-++--++-	38,691	186,843
8	rs16873161	106,501,425	C	T	0.958	0.961	0.982	0.94743	0.0301	0.07263	?++++-+++---+	21,672	164,963
8	rs56999386	104,678,848	T	C	0.83	0.83	0.998	1.0006	0.012	0.9574	--+--++-+++++	38,691	186,843
8	rs402658	109,107,822	G	A	0.732	0.734	0.996	1.01552	0.0106	0.1442	----+---+++--	38,691	186,843
8	rs7008054	109,954,636	T	C	0.922	0.922	0.993	1.00944	0.0176	0.5918	+++-+-+------	38,691	186,843
8	rs2154636	101,492,039	C	T	0.508	0.527	0.989	0.99104	0.0096	0.3516	++-+-++?+++++	37,991	186,143
8	rs7010742	109,020,139	A	C	0.956	0.952	0.992	1.00773	0.0237	0.7461	++-++---+-+--	38,691	186,843
8	rs9297415	109,572,560	C	T	0.367	0.348	0.993	0.98649	0.0097	0.1613	-++++++-++---	38,691	186,843
8	rs1786334	101,752,155	C	T	0.689	0.671	0.99	1.00813	0.0105	0.441	---++++?--+++	37,991	186,143
8	rs7002798	103,537,632	A	G	0.668	0.645	0.997	0.98462	0.01	0.1222	-+-+++++--++-	38,691	186,843
8	rs6994682	101,421,798	T	C	0.894	0.882	0.993	1.0005	0.0214	0.9798	?+--+-+?--+++	20,972	164,263
8	rs77485341	104,089,846	C	T	0.978	0.975	0.994	1.01898	0.0396	0.6341	?-++-?+---+--	21,563	164,854
8	rs78250514	104,817,525	A	C	0.972	0.977	0.971	0.99471	0.0268	0.844	-++--+-+++-++	38,691	186,843
8	rs7845707	105,999,557	A	G	0.96	0.957	0.992	0.96435	0.0253	0.1513	---+--++-++-+	38,691	186,843
8	rs10086906	108,788,369	C	T	0.928	0.921	0.966	0.97716	0.0196	0.2377	+-++?+?-?----	37,318	183,536
8	rs191655469	109,776,785	T	C	0.989	0.989	0.992	1.02634	0.0549	0.6358	-+??+????+-??	27,292	38,398
8	rs11989351	108,391,555	C	T	0.802	0.79	0.986	1.02296	0.0121	0.06178	---+--+------	38,691	186,843
8	rs4735065	109,467,444	C	T	0.367	0.35	0.999	0.98827	0.0095	0.2174	-++++++-++---	38,691	186,843
8	rs117982413	106,064,672	T	C	0.959	0.962	0.977	0.97531	0.0241	0.2994	--+++---++-++	38,691	186,843
8	rs16868691	102,919,547	A	G	0.98	0.978	0.994	1.00904	0.0356	0.8003	-+++-++--++?+	38,396	186,641
8	rs827591	104,364,497	T	C	0.0856	0.0774	0.995	0.9858	0.016	0.3728	+--+++-+-++-+	38,691	186,843
8	rs75654101	100,712,959	G	A	0.959	0.963	1	0.99631	0.0232	0.8719	-+-+-+-+++++-	38,691	186,843
8	rs73307751	108,172,407	A	G	0.665	0.691	0.992	0.9969	0.0099	0.752	--0-+-++--+-+	38,691	186,843
8	rs1842446	109,603,416	T	C	0.318	0.287	0.979	1.01167	0.0106	0.2737	+++??????????	34,176	175,141
8	rs3116089	101,057,587	C	A	0.843	0.84	0.997	0.998	0.0129	0.8774	++0++--------	38,691	186,843
8	rs2929061	106,386,493	C	T	0.469	0.451	1	0.98354	0.0094	0.07778	++-++++++++++	38,691	186,843
8	rs28481410	108,999,791	G	T	0.983	0.987	0.991	0.98187	0.0336	0.5854	+-++---+-+-?+	38,396	186,641
8	rs35832654	106,256,041	G	T	0.727	0.727	0.999	1.014	0.0107	0.1952	-------+++--+	38,691	186,843
8	rs35465599	104,669,542	C	T	0.969	0.969	0.994	1.01847	0.0347	0.5983	?+---++++--+-	21,672	164,963
8	rs28368512	109,984,526	C	T	0.964	0.959	0.994	1.0028	0.0263	0.9141	+----++-+-+++	38,691	186,843
8	rs523474	103,090,417	C	T	0.197	0.184	0.979	0.97472	0.012	0.03347	+++++---?--++	38,067	185,088
8	rs714460	108,197,156	T	A	0.387	0.392	0.999	1.002	0.0097	0.8363	++---++-?++--	38,067	185,088
8	rs676498	103,934,365	C	T	0.475	0.475	0.998	0.97326	0.0094	0.00394	++++--++?+-++	38,067	185,088
8	rs6991912	105,866,733	A	C	0.14	0.148	1	0.9719	0.0132	0.03059	---+---+---+-	38,691	186,843
8	rs16868711	102,921,933	C	T	0.98	0.978	0.993	1.00924	0.0357	0.7974	+---+--++--?-	38,396	186,641
8	rs1025856	106,733,869	A	G	0.609	0.626	1	0.98807	0.0095	0.2083	---+++-++-+++	38,691	186,843
8	rs2304501	104,443,283	G	A	0.777	0.772	0.996	0.99372	0.0106	0.5511	+--+-+-++++-+	38,691	186,843
8	rs1480561	109,587,774	A	G	0.367	0.348	0.988	0.98748	0.0097	0.193	+------+--+++	38,691	186,843
8	rs77519446	102,162,237	G	A	0.966	0.966	0.968	1.02511	0.0269	0.3577	--++?-+??-?-?	36,351	182,386
8	rs13257351	109,125,117	G	A	0.786	0.788	0.999	0.98196	0.0113	0.1074	++++++-+----+	38,691	186,843
8	rs656406	109,173,843	G	A	0.547	0.545	1	0.99531	0.0093	0.6167	-+++++--++---	38,691	186,843
8	rs1789975	107,445,448	A	G	0.65	0.642	0.996	0.9995	0.0099	0.9612	-+-+-+++--+-+	38,691	186,843
8	rs62518510	103,026,250	G	A	0.98	0.981	0.875	0.97775	0.0428	0.5983	++?-+????+-??	28,013	43,479
8	rs16898296	101,384,198	T	C	0.987	0.986	0.912	1.07047	0.0492	0.1662	++?-??++++-?+	29,744	48,277
8	rs181640861	104,488,407	C	T	0.986	0.984	0.898	1.10021	0.0491	0.0518	--??---????+?	27,048	39,011
8	rs150325035	103,482,276	G	A	0.912	0.925	0.989	0.98147	0.0158	0.2365	+++-+++-?--++	38,067	185,088
8	rs4437625	108,135,536	C	T	0.653	0.626	0.997	1.00511	0.0098	0.6013	---+---++---+	38,691	186,843
8	rs10086112	105,053,356	A	G	0.589	0.584	0.995	1.01532	0.0095	0.108	+-++++--+++-+	38,691	186,843
8	rs2957418	106,273,257	G	C	0.486	0.481	1	0.999	0.0092	0.9127	--+-+++++++++	38,691	186,843
8	rs1370798	105,728,054	G	C	0.84	0.829	0.995	1.02173	0.0129	0.09445	-+-+---------	38,691	186,843
8	rs11998224	107,312,350	A	T	0.861	0.858	0.999	1.01187	0.0136	0.3858	-+++++--++-++	38,691	186,843
8	rs4734668	103,791,669	C	T	0.534	0.534	0.999	1.01177	0.0095	0.2176	+----?-??++--	37,258	184,279
8	rs62526082	107,176,819	C	A	0.909	0.904	0.996	1.01015	0.016	0.5285	--+------+--+	38,691	186,843
8	rs12547056	106,753,738	C	A	0.697	0.708	0.997	0.9999	0.0101	0.9914	-++---+--+---	38,691	186,843
8	rs13256200	105,953,787	T	G	0.754	0.749	0.991	0.96948	0.011	0.004705	---+--+--++--	38,691	186,843
8	rs1125335	102,754,484	G	A	0.26	0.249	1	0.98748	0.0104	0.2279	++-++-+-++--+	38,691	186,843
8	rs3019965	108,023,634	C	T	0.203	0.209	0.998	1.02501	0.0126	0.04943	---+---+-+-++	38,691	186,843
8	rs10101839	106,319,151	A	G	0.673	0.678	0.995	0.99571	0.01	0.6681	+----+++--+--	38,691	186,843
8	rs35450967	105,474,842	A	G	0.751	0.759	0.992	1.003	0.0108	0.7783	++--+-++?-++-	38,067	185,088
8	rs3110435	107,621,361	A	G	0.471	0.467	1	1.0023	0.0093	0.8034	-++-++++--+-+	38,691	186,843
8	rs62515176	101,528,327	C	T	0.922	0.934	0.978	0.99422	0.0179	0.748	+-+-+++--++-+	38,691	186,843
8	rs17185155	103,282,012	T	C	0.953	0.964	0.998	0.96841	0.0208	0.1235	+--+---+?-+-+	38,067	185,088
8	rs28709120	104,141,867	T	C	0.847	0.846	0.985	1.0016	0.0148	0.9117	+-?-+++++++-+	30,410	48,850
8	rs61563104	107,304,001	T	A	0.697	0.685	1	0.95724	0.0103	0.00002	++++++-+?-+++	38,067	185,088
8	rs6985718	104,379,722	C	T	0.764	0.763	0.998	1.0021	0.0115	0.8542	-++??????????	34,176	175,141
8	rs1026610	107,938,778	A	T	0.216	0.229	1	0.9994	0.0112	0.9548	-+0+-+---+---	38,691	186,843
8	rs7839328	104,894,110	G	C	0.804	0.808	0.998	1.00491	0.0115	0.6705	++-++--+---+-	38,691	186,843
8	rs7818918	107,584,162	T	C	0.318	0.326	0.999	0.98069	0.01	0.05169	----+-+-++-+-	38,691	186,843
8	rs77314830	103,819,470	A	G	0.979	0.977	0.989	1.04154	0.0453	0.3681	?++-++-+?-++-	21,048	163,208
8	rs16869658	103,633,762	G	A	0.805	0.817	0.999	1.00803	0.0115	0.4861	++---+-+-----	38,691	186,843
8	rs11997464	109,873,177	A	C	0.69	0.682	0.997	1.01928	0.01	0.05665	++++++-+?+-+-	38,067	185,088
8	rs11996786	109,666,603	C	G	0.736	0.717	0.988	0.99352	0.0108	0.5458	----+?--?+---	37,958	184,979
8	rs4734179	109,549,830	A	G	0.702	0.698	0.987	0.98413	0.0105	0.1251	----++-+-+++-	38,691	186,843
8	rs112447110	103,460,944	G	C	0.968	0.972	0.96	1.03334	0.026	0.2076	-+-+--+--+---	38,691	186,843
8	rs62514472	108,476,547	G	A	0.963	0.962	0.999	0.97482	0.0244	0.2967	-++---++---+-	38,691	186,843
8	rs2957435	106,298,549	A	G	0.682	0.692	0.995	0.98906	0.01	0.2714	+------++--+-	38,691	186,843
8	rs7003194	106,285,266	C	G	0.965	0.971	0.997	1.01796	0.0253	0.4812	++----+++--++	38,691	186,843
8	rs72670260	105,932,792	C	T	0.847	0.852	1	1.04289	0.0125	0.00078	---+-+-++--++	38,691	186,843
8	rs73701145	107,347,250	A	G	0.98	0.978	0.995	1.05169	0.0346	0.1449	++++-+-----+-	38,691	186,843
8	rs12707773	103,619,314	T	C	0.64	0.618	0.999	0.99591	0.0099	0.6751	-+++++-+?----	38,067	185,088

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ADHD GWAS Summary Statistics (PGC)

Mirror of Psychiatric Genomics Consortium (PGC) summary statistics for ADHD (adhd2022), redistributed in a single Apache Parquet file for use with OpenMed Genomics.

Source

Primary citation: Demontis et al., Nature Genetics 2023
Original distributor: Psychiatric Genomics Consortium (https://pgc.unc.edu/for-researchers/download-results/)

This mirror exists only because the upstream OpenMed mirror became inaccessible. No modifications have been made to the underlying data; per-shard parquet files were concatenated into a single file for convenient streaming.

File

pgc-adhd_adhd2022.parquet -- one Apache Parquet file containing the full summary statistics table in the PGC's published schema (SNP, CHR, BP, A1, A2, FRQ, OR/BETA, SE, P, ...).

Usage

import polars as pl
df = pl.read_parquet(
    "https://huggingface.co/datasets/turmex2/pgc-adhd/resolve/main/pgc-adhd_adhd2022.parquet"
)

License & terms of use

PGC summary statistics are released for non-commercial research use only. Do not attempt to re-identify individuals. Results derived from these data are not a clinical diagnosis. See the original publication for the full data-use agreement.

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ADHD GWAS Summary Statistics (PGC)

Source

File

Usage

License & terms of use

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